Poster
Peri Tobias
Dr
University of Sydney
Camperdown, NSW, AUSTRALIA
Jacob Downs (he/him/his)
Postdoctoral Researcher
University of Sydney
Camperdown, New South Wales, Australia
Sylvie Nolf
University of Sydney
Camperdown, New South Wales, Australia
Agus Purwantara
Mars Cocoa Research Station, Pangkep, Indonesia
Pangkep, Sulawesi Selatan, Indonesia
Junaid Muhammad
Lecturer
Cocoa Research Center Faculty of Agriculture, Universitas Hasanuddin, Makassar, Indonesia
Makassar, Sulawesi Selatan, Indonesia
Eirene Brugman
Lecturer
Cocoa Research Center Faculty of Agriculture, Universitas Hasanuddin, Makassar, Indonesia
Makassar, Sulawesi Selatan, Indonesia
David Guest
Professor of Plant Pathology
University of Sydney
Camperdown, New South Wales, Australia
The fastidious basidiomycete Ceratobasidium theobromae (P.H.B. Talbot & Keane) Samuels & Keane is a biotrophic pathogen that causes vascular-streak dieback (VSD) of Theobroma cacao L. (cocoa). The fungus is difficult to culture in vitro due its slow growth, and colonies are overrun by commensal fungi, hampering inoculation studies and Koch’s postulates. Recently, C. theobromae has been identified as the cause of Cassava Witches Broom Disease of Manihot esculenta Crantz (cassava) in southeast Asia and the Americas. The pathogen is also closely related to the causal agent of VSD in Cercis canadensis L. (redbud). These occurrences raise serious concerns that the pathogen is spreading globally. However, there is no evidence that isolates from cocoa are virulent on cassava or other hosts, or whether the species includes host-specific populations. Fungal homeodomain (HD) transcription factor mating-type loci are known to be polymorphic within the Basidiomycota. To understand diversity, and potential for sexual recombination we developed an assay for HD alleles with long amplicon sequences using Oxford Nanopore MinION. Interestingly, our work has shown that C. theobromae is homokaryotic, despite evidence of sexual recombination. We also determined that the HD locus is homozygous indicating a bipolar mating strategy, likely an evolutionary response to few available mating types. Our work shows that this assay can distinguish regional, and potentially host, strain variation.